In ImageJ, it is easy to make an images gallery with make montage.
Complete particles gallery made with make montage in imagej |
The script to produce the particles from the metaphase is here. The end of the code tries to produce a particles (single/overlapping chromomes, nuclei) gallery using pylab.subplot, it is commented because it doesn't work.
I get the answer at pythonvision:
import readmagick
import pylab
import os
user=os.path.expanduser("~")
workdir=os.path.join(user,"Applications","ImagesTest","jp","Jpp48","13","DAPI","particules")
file="part1.png"
if __name__ == "__main__":
file="part1.png"
complete_path=os.path.join(workdir,file)
i1=readmagick.readimg(complete_path)
file="part2.png"
complete_path=os.path.join(workdir,file)
i2=readmagick.readimg(complete_path)
file="part3.png"
complete_path=os.path.join(workdir,file)
i3=readmagick.readimg(complete_path)
file="part4.png"
complete_path=os.path.join(workdir,file)
i4=readmagick.readimg(complete_path)
pylab.subplot(2,2,1)
pylab.imshow(i1)
pylab.subplot(2,2,2)
pylab.imshow(i2)
pylab.subplot(2,2,3)
pylab.imshow(i3)
pylab.subplot(2,2,4)
pylab.imshow(i4)
pylab.show()
Axis can be removed from the images as follow:
pylab.subplot(2,2,1,frameon=False, xticks=[], yticks=[])
click to enlarge |
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